HHsearch alignment for GI: 254780822 and conserved domain: TIGR02200
>TIGR02200 GlrX_actino Glutaredoxin-like protein; InterPro: IPR011915 Glutaredoxins , , , also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system . Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond . It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif..
Probab=97.05 E-value=0.00026 Score=45.95 Aligned_cols=68 Identities=22% Similarity=0.427 Sum_probs=46.8
Q ss_pred EEECCCCHHHHHHHHHH-HHHHHHCCCCCCCCCCCCCCCHHHHHHH-----CCCCCCEEEEEECCEEEEEEECCCCCHHH
Q ss_conf 98769970222134666-6542100012333226723265777762-----31568879999799898588748999899
Q gi|254780822|r 25 DFWASWCRPCVKLSPII-DDIADELADKVKITKLDIEESSEISTRY-----QISSIPTLILFKDGKVIDRMMPGASSQSD 98 (107)
Q Consensus 25 ~f~a~wC~~C~~~~p~~-~~l~~~~~~~i~~~~vd~d~~~~l~~~~-----~v~~~Pt~~~~~~g~~~~~~~~g~~~~~~ 98 (107)
T Consensus 4 vY~~~WCgyC~~l~~~Lk~~~G~~Ye------~~di~~d~~AA~~v~svn~Gn~~vPtV~~-~DGs~~-----tnPSa~~ 71 (78)
T TIGR02200 4 VYATTWCGYCAQLMRTLKDKDGAAYE------VVDIEEDEEAADYVKSVNDGNKTVPTVKF-ADGSFL-----TNPSAAQ 71 (78)
T ss_pred EEECCCCCHHHHHHHHHHHCCCCCCE------EEECCCCCCCCCEEEEECCCCCEEEEEEE-CCCCCC-----CCCCHHH
T ss_conf 64069980678998753430799511------45245484755286653088713016874-799444-----3867789
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780822|r 99 IIEWIL 104 (107)
Q Consensus 99 l~~~i~ 104 (107)
T Consensus 72 v~~klq 77 (78)
T TIGR02200 72 VKAKLQ 77 (78)
T ss_pred HHHHHC
T ss_conf 999843