HHsearch alignment for GI: 254780822 and conserved domain: cd02948
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=99.89 E-value=1.5e-22 Score=151.01 Aligned_cols=99 Identities=21% Similarity=0.532 Sum_probs=86.2
Q ss_pred EEE-CHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHCCCCCCEEEEEE
Q ss_conf 775-767799999848994999987699702221346666542100012-333226723265777762315688799997
Q gi|254780822|r 4 LKV-DTKSFDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADELADK-VKITKLDIEESSEISTRYQISSIPTLILFK 81 (107)
Q Consensus 4 i~i-~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~ 81 (107)
T Consensus 2 i~I~s~e~f~~-~i~~~~lvvVdf~A~WCGPCk~i~P~~~~l~~e~~~~~~~~~~~~~d~~-~~~~~~~i~s~PTf~~fk 79 (102)
T cd02948 2 VEINNQEEWEE-LLSNKGLTVVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEADTI-DTLKRYRGKCEPTFLFYK 79 (102)
T ss_pred EEECCHHHHHH-HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCH-HHHHHHCCEEEEEEEEEE
T ss_conf 36459999999-8747994999998997745788789999999874787089999779986-799984988630899999
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHC
Q ss_conf 9989858874899989999999841
Q gi|254780822|r 82 DGKVIDRMMPGASSQSDIIEWILSR 106 (107)
Q Consensus 82 ~g~~~~~~~~g~~~~~~l~~~i~~~ 106 (107)
T Consensus 80 nG~~v~~~-~GA-~~~~L~~~I~~l 102 (102)
T cd02948 80 NGELVAVI-RGA-NAPLLNKTITEL 102 (102)
T ss_pred CCEEEEEE-ECC-CHHHHHHHHHHC
T ss_conf 99999999-798-989999999749