HHsearch alignment for GI: 254780822 and conserved domain: cd02949
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=99.95 E-value=9.3e-28 Score=181.01 Aligned_cols=95 Identities=27% Similarity=0.516 Sum_probs=90.9
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEE
Q ss_conf 77999998489949999876997022213466665421000123332267232657777623156887999979989858
Q gi|254780822|r 9 KSFDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEESSEISTRYQISSIPTLILFKDGKVIDR 88 (107)
Q Consensus 9 ~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~g~~~~~ 88 (107)
T Consensus 3 ~~~~~l~~~s~k~VlV~F~A~wCgpCk~l~P~l~~la~ey~~~v~f~kvDvd~~~~la~~~~I~~~PT~~~fk~g~~v~~ 82 (97)
T cd02949 3 YALRKLYHESDRLILVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQEIAEAAGIMGTPTVQFFKDKELVKE 82 (97)
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCEEEEEECCEEEEE
T ss_conf 14899998579949999989998565642699999999837971999996887988999819931778999999999688
Q ss_pred EECCCCCHHHHHHHHH
Q ss_conf 8748999899999998
Q gi|254780822|r 89 MMPGASSQSDIIEWIL 104 (107)
Q Consensus 89 ~~~g~~~~~~l~~~i~ 104 (107)
T Consensus 83 ~-~G~~~~~~l~~~ie 97 (97)
T cd02949 83 I-SGVKMKSEYREFIE 97 (97)
T ss_pred E-ECCCCHHHHHHHHC
T ss_conf 8-88888999999759