HHsearch alignment for GI: 254780822 and conserved domain: cd02965
>cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO. They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.
Probab=97.93 E-value=3.9e-05 Score=50.70 Aligned_cols=89 Identities=16% Similarity=0.426 Sum_probs=67.4
Q ss_pred ECHHHHHHHHHHCCCCEEEEEECCCCHHHHH-----HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEE
Q ss_conf 5767799999848994999987699702221-----34666654210001233322672326577776231568879999
Q gi|254780822|r 6 VDTKSFDSEVLECSNPVVVDFWASWCRPCVK-----LSPIIDDIADELADKVKITKLDIEESSEISTRYQISSIPTLILF 80 (107)
Q Consensus 6 i~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~-----~~p~~~~l~~~~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~ 80 (107)
T Consensus 15 vd~~~~d~~-~~~~~~~vl-fl~g--Dp~R~pE~~DvaVVLPEL~~~f~~~~~~Avv~~~~E~~l~~rfgv~~~Pallf~ 90 (111)
T cd02965 15 VDAATLDDW-LAAGGDLVL-LLAG--DPVRFPEVLDVAVVLPELLKAFPGRFRAAVVGRADEQALAARFGVLRTPALLFF 90 (111)
T ss_pred CCCCCHHHH-HHCCCCEEE-EECC--CCCCCCCCCCHHHCCHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 045236778-747884899-9589--976586622223130999998517331878575889999997397547759999
Q ss_pred ECCEEEEEEECCCCCHHHH
Q ss_conf 7998985887489998999
Q gi|254780822|r 81 KDGKVIDRMMPGASSQSDI 99 (107)
Q Consensus 81 ~~g~~~~~~~~g~~~~~~l 99 (107)
T Consensus 91 r~G~~vg~-i~gi~dW~eY 108 (111)
T cd02965 91 RDGRYVGV-LAGIRDWDEY 108 (111)
T ss_pred ECCEEEEE-ECCCCCHHHH
T ss_conf 89988130-3252449988