HHsearch alignment for GI: 254780822 and conserved domain: cd02966

>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=99.21  E-value=1.8e-11  Score=87.16  Aligned_cols=73  Identities=32%  Similarity=0.761  Sum_probs=60.5

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCC-----------------------CCHHHHHHHCCCC
Q ss_conf             899499998769970222134666654210001-2333226723-----------------------2657777623156
Q gi|254780822|r   18 CSNPVVVDFWASWCRPCVKLSPIIDDIADELAD-KVKITKLDIE-----------------------ESSEISTRYQISS   73 (107)
Q Consensus        18 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~i~~~~vd~d-----------------------~~~~l~~~~~v~~   73 (107)
T Consensus        18 ~gk~~vl~f~a~wC~~C~~~~~~l~~~~~~~~~~~v~vi~i~~~~~~~~~~~~~~~~~~~~~p~~~D~~~~~~~~~~v~~   97 (116)
T cd02966          18 KGKVVLVNFWASWCPPCRAEMPELEALAKEYKDDGVEVVGVNVDDDDPAAVKAFLKKYGITFPVLLDPDGELAKAYGVRG   97 (116)
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCC
T ss_conf             99959999992789975453642023301344564138999788788899999887439833899869852899849980


Q ss_pred             CCEEEEE-ECCEEEEEEE
Q ss_conf             8879999-7998985887
Q gi|254780822|r   74 IPTLILF-KDGKVIDRMM   90 (107)
Q Consensus        74 ~Pt~~~~-~~g~~~~~~~   90 (107)
T Consensus        98 ~P~~~iid~~G~i~~~~~  115 (116)
T cd02966          98 LPTTFLIDRDGRIRARHV  115 (116)
T ss_pred             CCEEEEECCCCEEEEEEE
T ss_conf             457999999999999997