HHsearch alignment for GI: 254780822 and conserved domain: cd02999

>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=99.92  E-value=6.3e-25  Score=164.71  Aligned_cols=99  Identities=16%  Similarity=0.342  Sum_probs=88.0

Q ss_pred             EEEECHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
Q ss_conf             17757677999998489949999876997022213466665421000123332267232657777623156887999979
Q gi|254780822|r    3 ALKVDTKSFDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEESSEISTRYQISSIPTLILFKD   82 (107)
Q Consensus         3 ~i~i~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~   82 (107)
T Consensus         2 ~~~~v~~~~d~~v~n~~~~vlV~FYApWC~hCk~l~P~~~~la~~~~~~~~~a~~~~~~~~~l~~~ygV~g~PTi~lf~~   81 (100)
T cd02999           2 PEEVLNIALDLMAFNREDYTAVLFYASWCPFSASFRPHFNALSSMFPQIRHLAIEESSIKPSLLSRYGVVGFPTILLFNS   81 (100)
T ss_pred             EEEHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECC
T ss_conf             06548765889966689529999997888888987189999998789984899995457866787467543657999679


Q ss_pred             CEEEEEEECCCCCHHHHHHHH
Q ss_conf             989858874899989999999
Q gi|254780822|r   83 GKVIDRMMPGASSQSDIIEWI  103 (107)
Q Consensus        83 g~~~~~~~~g~~~~~~l~~~i  103 (107)
T Consensus        82 g~~~--~Y~G~Rt~~~l~~F~  100 (100)
T cd02999          82 TPRV--RYNGTRTLDSLAAFY  100 (100)
T ss_pred             CCEE--CCCCCCCHHHHHHHC
T ss_conf             9660--478998989998549