HHsearch alignment for GI: 254780822 and conserved domain: cd03001
>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.
Probab=99.96 E-value=8.8e-29 Score=186.90 Aligned_cols=102 Identities=25% Similarity=0.531 Sum_probs=97.9
Q ss_pred EEEECHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEC
Q ss_conf 17757677999998489949999876997022213466665421000123332267232657777623156887999979
Q gi|254780822|r 3 ALKVDTKSFDSEVLECSNPVVVDFWASWCRPCVKLSPIIDDIADELADKVKITKLDIEESSEISTRYQISSIPTLILFKD 82 (107)
Q Consensus 3 ~i~i~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~i~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 82 (107)
T Consensus 2 Vv~l~~~nF~~~v~~~~~~vlV~Fya~wC~~C~~~~P~~~~~a~~~~~~~~~a~vd~~~~~~l~~~~~I~~~PTi~~f~~ 81 (103)
T cd03001 2 VVELTDSNFDKKVLNSDDVWLVEFYAPWCGHCKNLAPEWKKAAKALKGIVKVGAVDADVHQSLAQQYGVRGFPTIKVFGA 81 (103)
T ss_pred EEEECHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCEECEEEEEEC
T ss_conf 16926562899985499849999978988773544848999999806862899998824431144269737498999969
Q ss_pred CEEEEEEECCCCCHHHHHHHHH
Q ss_conf 9898588748999899999998
Q gi|254780822|r 83 GKVIDRMMPGASSQSDIIEWIL 104 (107)
Q Consensus 83 g~~~~~~~~g~~~~~~l~~~i~ 104 (107)
T Consensus 82 G~~~~~~Y~G~R~~e~l~~F~~ 103 (103)
T cd03001 82 GKNSPQDYQGGRTAKAIVSAAL 103 (103)
T ss_pred CCCCEEEECCCCCHHHHHHHHC
T ss_conf 9556157678899999999669