HHsearch alignment for GI: 254780823 and conserved domain: PHA00619
>PHA00619 CRISPR-associated Cas4-like protein.
Probab=97.60 E-value=0.0046 Score=36.49 Aligned_cols=111 Identities=12% Similarity=0.115 Sum_probs=53.7
Q ss_pred CCEEEEEEEEEEEECCCCCEEEEECCCCCCCCHHHH--HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 237999999788887998589997268534688798--423012169999999828867778557421388860686655
Q gi|254780823|r 894 IGIHLTGFADRIDLLKSGFVDITDYKTGDNPKKETA--QKLIDPQLSLEAAALKAGSFSQIDCRKVANLFYIRLKQKFKI 971 (1040)
Q Consensus 894 ~~~~l~GrIDRid~~~dG~~~IvDYKTG~~p~~~~~--~~~~~~QL~lY~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~ 971 (1040)
T Consensus 94 lGf~I~GRiDay~~--e-~~~v~eiK~t~~~~l~~~~~~~hl-~QLN~Yl~m~~a---------~~GyLy~V~~dgr~e- 159 (210)
T PHA00619 94 LGFEIVGRIDVYDK--E-ENTIYELKYTHMQDLDKGRLNNYL-RQLNYYIEMANA---------MAGYLIIVHADGRVE- 159 (210)
T ss_pred CCEEEEEEEEEECC--C-CCEEEEEEECCCCCCCCCCCHHHH-HHHHHHHHHHHH---------HCCEEEEEECCCCHH-
T ss_conf 56599978874237--7-775999985366667778707499-999999999874---------257699998489847-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 434565455898889999999999999998488988555545101566898654420
Q gi|254780823|r 972 DCITNDKKKYSADELSEKSLKNLIEIVTLLQNGEQPFISHLRLSEKSNIQSEYDHLA 1028 (1040)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~l~ 1028 (1040)
T Consensus 160 -eik-----~~~~~t--~l~~r~~af-~i~~~E~~-lpp~K~~p~~~C~~CP~~~~C 206 (210)
T PHA00619 160 -EIK-----RDWKET--DLENRANAF-GISVEENI-LPPKKSKPDRECIECPFYNVC 206 (210)
T ss_pred -HHH-----HHHHHH--HHHHHHHHH-CCCCHHCC-CCCCCCCCCCCEEECCCEEEE
T ss_conf -776-----664430--266654440-02320202-799989999610247710166