HHsearch alignment of GI: 254780823 and MMDB domain: 2is6_A_1-106_189-283
>2is6_A (A:1-106,A:189-283) DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A*
Probab=98.16 E-value=7.2e-05 Score=47.92 Aligned_cols=160 Identities=12% Similarity=0.068 Sum_probs=95.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCEECCEEEEHHHH
Q ss_conf 88489838988937999999971121011236789813322206762796899999999985118886514033125776
Q gi|254780823|r 5 KPNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFIEITGKKSTILPIIKSLGDV 84 (1040)
Q Consensus 5 ~~~v~~~~~~~~fl~~~a~~l~~~~~~~~~~~~~~~p~~L~~v~vl~ptrraa~~Lr~~l~~~~~~~~~~~P~i~t~~~~ 84 (1040)
.+-+..-+||.. ++.+-......+... .+.+| .+++|++||+.++..+++.+....+. ..-...+.|++++
T Consensus 23 ~~~lV~g~aGsG--KT~~~~~~i~~ll~~---~~~~~---~~il~~t~t~~a~~~l~~~l~~~~~~-~~~~~~v~t~h~~ 93 (201)
T 2is6_A 23 SNLLVLAGAGSG--KTRVLVHRIAWLMSV---ENCSP---YSIMAVTFTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGL 93 (201)
T ss_dssp SCEEEECCTTSS--HHHHHHHHHHHHHHT---SCCCG---GGEEEEESSHHHHHHHHHHHHHHHCS-CCTTCEEEEHHHH
T ss_pred CCEEEEEECCHH--HHHHHHHHHHHHHHH---CCCCC---CCEEEEECCHHHHHHHHHHHHHHCCC-CCCCEEEEEHHHH
T ss_conf 998999828659--999999999999981---99993---40999814099999999999986277-7688399749999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 56554045433467788888189999999999999863100000012232111356978899989999999999997599
Q gi|254780823|r 85 VEEKFTADLLLSYNLNPPVSNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEEK 164 (1040)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~L~~l~d~~~~~~~ 164 (1040)
............ .+ .+++...
T Consensus 94 ~~~~l~~~~~~~--------------------------------------------------~~----~d~~~~a----- 114 (201)
T 2is6_A 94 AHRLLRAHHMDA--------------------------------------------------NF----AELLLRA----- 114 (201)
T ss_dssp HHHHHHHTTTTT--------------------------------------------------TH----HHHHHHH-----
T ss_pred HHHHHHHHHHHH--------------------------------------------------CC----CHHHHHH-----
T ss_conf 999999969980--------------------------------------------------91----0113689-----
Q ss_pred CHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
Q ss_conf 97898740022020799999999999999999975324888989999999987443442276880999834566167999
Q gi|254780823|r 165 KWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHLMKGTKGPIIIAGSTGSIPATAR 244 (1040)
Q Consensus 165 ~~~~L~~l~~~~~~~~w~~~~~fL~~~~~~~~~~l~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~~~ 244 (1040)
. ..+.. ++ ........++..|+||++||+++.+..
T Consensus 115 ------------------------------~-~~l~~----~~----------~~~~~~~~~~~~i~iDE~QD~~~~~~~ 149 (201)
T 2is6_A 115 ------------------------------H-ELWLN----KP----------HILQHYRERFTNILVDEFQDTNNIQYA 149 (201)
T ss_dssp ------------------------------H-HHHHH----CH----------HHHHHHHHHCCEEEESSGGGCCHHHHH
T ss_pred ------------------------------H-HHHHH----HH----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ------------------------------9-99876----19----------999999887766666653000022354
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 99998614896899824863210788864334201
Q gi|254780823|r 245 LMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKST 279 (1040)
Q Consensus 245 ll~al~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 279 (1040)
++..+.. .+..++..+|+++.++.|+++.+...
T Consensus 150 ll~~l~~--~~~~~~~vGD~~QsIy~f~ga~~~~~ 182 (201)
T 2is6_A 150 WIRLLAG--DTGKVMIVGDDDQSIYGWRGAQVENI 182 (201)
T ss_dssp HHHHHHT--TTCEEEEEECGGGCCCGGGTCCTHHH
T ss_pred HHHHCCC--CCCEEEEEECCCCHHCCCCCHHHHHH
T ss_conf 4442036--65168985136301011244066899