Probab=99.86 E-value=2.5e-18 Score=133.67 Aligned_cols=316 Identities=14% Similarity=0.088 Sum_probs=173.2
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHH---CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHH
Q ss_conf 7815995599899999999999998642---2984999802641135788843551377766569003528898999999
Q gi|254780823|r 357 SDVALIEADNEREEAISIAIALRMSLDE---NKKKSALITADRNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSL 433 (1040)
Q Consensus 357 ~~v~~~~a~~~~~Ea~~ia~~lr~~~~~---~~~~~avv~~d~~~~~~v~~~L~~~gipv~~s~g~pL~~~p~v~~l~~l 433 (1040)
..|+++.+.+..+|+..|+..|...+.. +.++|||++|....+..+...|...|||+....+..+..+|.++.+.++
T Consensus 3 ~~i~v~~~~~~~~E~~~i~~~I~~~~~~~g~~~~DIAILvR~~~~~~~l~~~L~~~gIP~~~~~~~~~~~~~~i~~l~~~ 82 (333)
T d1uaaa2 3 AELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAY 82 (333)
T ss_dssp CCBEEEECSSHHHHHHHHHHHHHHHHHHHCCCTTTEEEEESSSGGGTTHHHHHHHTTCCEEESCCCCGGGCHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
T ss_conf 97489967998999999999999999856998213899996827499999999987998899678531000144455654
Q ss_pred HHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCC
Q ss_conf 99983799978999986296545667938999999973223210455777811178887522011444434552010155
Q gi|254780823|r 434 LNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLS 513 (1040)
Q Consensus 434 l~~~~~~~~~~~l~~LL~sPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1040)
++++..+.+...+..+|++|.+..................... ........ . .....
T Consensus 83 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~~~~----~-------~~~~~ 139 (333)
T d1uaaa2 83 LRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSM------------FTASFDMG----L-------SQTLS 139 (333)
T ss_dssp HHHHHCTTCHHHHHHHSSTTCCCCCHHHHHHHHHHHHHTTSCH------------HHHTTCTT----H-------HHHSC
T ss_pred HHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHH------------HHHHHHHH----H-------HHHHH
T ss_conf 2021222057888887537422332112467787766302016------------78999988----7-------54011
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34325799999998999999875011002210237889999999999972367632111456657779999999986642
Q gi|254780823|r 514 EEDKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIE 593 (1040)
Q Consensus 514 ~~~~~~~~~l~~~l~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 593 (1040)
.......... ...+..+......... .................... . ..............+.........
T Consensus 140 ~~~~~~~~~~----~~~~~~l~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~-~---~~~~~~~~~~~~~~l~~~~~~~~~ 210 (333)
T d1uaaa2 140 GRGYEALTRF----THWLAEIQRLAEREPI-AAVRDLIHGMDYESWLYETS-P---SPKAAEMRMKNVNQLFSWMTEMLE 210 (333)
T ss_dssp SHHHHHHHHH----HHHHHHHHHHHTTCHH-HHHHHHHHHHTHHHHHHHHS-S---SHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6778766558----8999999998742851-46889999873667778753-0---005699999847878999998753
Q ss_pred CC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 13-76644778899999986224433566778773798034333566586378528631134566666764896788564
Q gi|254780823|r 594 TG-SCIKANAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDL 672 (1040)
Q Consensus 594 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~v~~~~~a~~~~~~~v~v~gl~e~~~P~~~~~~~~l~~~~r~~l 672 (1040)
.. .........+....... ............+.|++||.|.++|++|++|+++|++++.||.....+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~V~l~TiH~sKGlE~~~V~i~g~~~~~~p~~~~~~~---------- 279 (333)
T d1uaaa2 211 GSELDEPMTLTQVVTRFTLR-DMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDE---------- 279 (333)
T ss_dssp CCSSSCCCCHHHHHHHHHTT-CCCCC---CCCCCSEEEEESTTTSSCCEEEEEECCCBSSTTTTHHHHTT----------
T ss_pred HCCCCCHHHHHHHHHHHHHH-HHHHCCCHHCCCCCEEEEEHHHHHCCCCCEEEECCCCCCCCCCCCCCCC----------
T ss_conf 20233125678999999864-4332021011578579951133212578826724864687855001884----------
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCC-EEEEEEECCCCC----CCCCCCHHHHHHH
Q ss_conf 89996678889999999985598-599992046777----6656653788877
Q gi|254780823|r 673 NLKTAEKYIGQAAHDFEMANGTR-HLIYTRSLRENN----IPTIASRWLQRLL 720 (1040)
Q Consensus 673 ~l~~~e~~~~~~~~~~~~~~~a~-~v~lt~~~~~~~----~~~~ps~~l~~l~ 720 (1040)
+......+.+|+.+++|+ ++++|++..... ....||+|+.++.
T Consensus 280 -----~~leEerRL~YVA~TRA~~~L~is~~~~~~~~g~~~~~~~S~Fl~el~ 327 (333)
T d1uaaa2 280 -----DNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELP 327 (333)
T ss_dssp -----TCCHHHHHHHHHHHHTEEEEEEEEECSSCCGGGSCCCCCBCHHHHHSC
T ss_pred -----CCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHC
T ss_conf -----318999988572698885646988822020036776788998598709
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: DEXX box DNA helicase
species: Escherichia coli, RepD [TaxId: 562]