PSIBLAST alignment of GI: 254780823 and protein with PDB id: 3pjr
gi|4930230|pdb|3PJR|A Chain A, Helicase Substrate Complex Length = 724
>gi|15988533|pdb|1QHG|A Chain A, Structure Of Dna Helicase Mutant With Adpnp Length = 724
>gi|157833507|pdb|1PJR|A Chain A, Structure Of Dna Helicase Length = 724
Score = 90.8 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/727 (10%), Positives = 192/727 (26%), Gaps = 110/727 (15%)
Query: 46 SVTIYVPTKRAIQELRSEFIEITGKKS--TILPIIKSLGDVVEEKFTADLLLSYNLNPPV 103
++ T +A +E+R + G + I + + D+ +N
Sbjct: 58 NILAITFTNKAAREMRERVQSLLGGAAEDVW---ISTFHSMCVRILRRDI-DRIGINRNF 113
Query: 104 SNIQRLLELARLILIWRNKLPDIIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEE 163
S + +L+ + I + K D K + + I + E
Sbjct: 114 SILDPTDQLSVMKTILKEKNIDPKKFEP------------------RTILGTISAAKNEL 155
Query: 164 KKWEDLHALKNEKYGMWWLLAADFLKIASKYWTERLVELNASSPVGYQIALMRAEAE--- 220
E + ++ + + + +RL+ ++ + ++
Sbjct: 156 LPPEQFAK----RASTYYEKV---VSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPD 208
Query: 221 --HLMKGTKGPIIIAGSTGSIPATARLMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKS 278
H + I I + A L+ +A + D W ++
Sbjct: 209 VLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERFQN--ICAVGDADQSIYRWRGADIQN 266
Query: 279 TNITSSNTTYSTHPQYSLAKLLDFLDIKREDVKRLGNVSNEMYGRSMVISKSFLPPDTSD 338
+P + L + ++ V R
Sbjct: 267 ILSFE-----RDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNR------------KPK 309
Query: 339 MRNTDILENKIPNIQKCFSDVALIEADNEREEAISIAIALRMSL---DENKKKSALITAD 395
T+ E K + EA NE +EA +A +R ++ + + A++
Sbjct: 310 RIWTENPEGKP---------ILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRT 360
Query: 396 RNLARRVKLELTRFGINIDISAGIPLSTTLHSSILTSLLNAIFKLNDFMAIATLVKHPLA 455
+R ++ L + I I G+ + + L I +D +++ ++ P
Sbjct: 361 NAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVP-- 418
Query: 456 KFGFPEKYLSRAKNALELVALRGNKNSYDIMDLKSLVLDRIATQKNNTHVPHWQSRLSEE 515
+ + +D++ + + +++ E
Sbjct: 419 -----------------------------KRGIGASTIDKLVRYAADHELSLFEALGELE 449
Query: 516 DKELAVLLVDHILQCITPLVTYKTNKNSTCGNLSISDWTKLTVTCLQNVCLDEHRKLPNL 575
L + + L + + + + + L
Sbjct: 450 MIGLGAKAAGALAAFRSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRL 509
Query: 576 WFEEEGKTLSSLFSKIIETGSCIKANAIEWIDIITRLIDGETVKPKIEKSSTLFILGTLE 635
+E +++ F + + S I + +D + + + ++
Sbjct: 510 ENLDEFLSVTKHFENVSDDKSLIAFLTDLA---LISDLDELDGTEQAAEGDAVMLMTLHA 566
Query: 636 SRLLNFDTLILGGLNEGVWPKNTAKNPFLSRVMQSDLNLKTAEKYIGQAAHDFEMANGTR 695
++ L F + L G+ EG++P N + + L + +
Sbjct: 567 AKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAYVGITRAEEELVLTSAQM---- 622
Query: 696 HLIYTRSLRENNIPTIASRWLQRLLVLGGTDFFDNLKKRGQCYLDWTRKLDYTTKQPHYK 755
R+L N SR+L + + + +
Sbjct: 623 -----RTLFGNIQMDPPSRFLNEIPAHLLETASRRQAGASRPAVSRPQASGAVGSWKVGD 677
Query: 756 RPKPFPP 762
R
Sbjct: 678 RANHRKW 684