RPSBLAST alignment for GI: 254780823 and conserved domain: COG3893
>gnl|CDD|33681 COG3893, COG3893, Inactivated superfamily I helicase [DNA replication, recombination, and repair]. Length = 697
Score = 503 bits (1295), Expect = e-142
Identities = 290/754 (38%), Positives = 405/754 (53%), Gaps = 59/754 (7%)
Query: 6 PNVFTIAPSSPFFREMIPALLNGTLVENFRYDPLNPLLLASVTIYVPTKRAIQELRSEFI 65
VF+I P PF + ALLNG L FR PL+PL LAS TIYVPT + LR F+
Sbjct: 1 MRVFSIPPGPPFLPTLAEALLNGRLTPGFR-MPLDPLALASATIYVPTSA--RALRHFFV 57
Query: 66 EITGKKSTILPIIKSLGDVVEEKFTADLLLSYNLNPPVSNIQRLLELARLILIWRNKLPD 125
++ G ++ +LP I+ LG E F A+ +L PP+S+ +RL+ LARLIL WR+ LP
Sbjct: 58 DLGGGRA-LLPRIRPLG---EAFFDAEPAAYLDLAPPISSRERLILLARLILAWRDSLPK 113
Query: 126 IIKDLYPESPLSLPISPANAIWLAKNLADIIDIIETEEKKWEDLHALKNEKYGMWWLLAA 185
+ L+ + L P S A+AIWLA+NL+++ D+ +TE +W+ L L WW +
Sbjct: 114 HVLALF-QDELFFPASTADAIWLARNLSELFDLFDTESSEWDKLDDLATGDLAAWWQVTL 172
Query: 186 DFLKIASKYWTERLVELNASSPVGYQIALMRAEAEHLMKGT-KGPIIIAGSTGSIPATAR 244
+FL+I W +RL EL S+P ++ AL RAEA L GP+I AGSTG PATA
Sbjct: 173 EFLEIVYDAWPKRLEELGRSNPAAHRNALFRAEAMRLKNNPPTGPVIAAGSTG--PATAD 230
Query: 245 LMSTVANHPNGAIVLPGLDCHIPTAIWNTITEKSTNITSSNTTYSTHPQYSLAKLLDFLD 304
L++ +A P GA+VLPGLD W I HPQY LL
Sbjct: 231 LLAVIAALPQGAVVLPGLDE------WQAI--------------EGHPQYGFHSLLG--- 267
Query: 305 IKREDVKRLGNVSNEMYGRSMVISKSFLPPDTSDMRNTDILENKIPNIQKCFSDVALIEA 364
+R+ + + ++ P + T + + + V LIEA
Sbjct: 268 AERQLLLEIAEAD-----------EALRPAEL-----TASWDKYNRGFLEALAFVTLIEA 311
Query: 365 DNEREEAISIAIALRMSLDENKKKSALITADRNLARRVKLELTRFGINIDISAGIPLSTT 424
NER+EA +IA+ALR +L E + +AL+T DRNLARRV EL RFG+ D SAG PLS T
Sbjct: 312 ANERDEAYAIALALREAL-EAPRTAALVTPDRNLARRVATELARFGVEADDSAGTPLSAT 370
Query: 425 LHSSILTSLLNAIFKLNDFMAIATLVKHPLAKFGFPEKYLSRAKNALELVALRGNKNSYD 484
+++L L+ A+ + D +A+ L+KHPLA+FG L A N LEL ALRG K S
Sbjct: 371 PQAALLMLLIEAVLRPGDPVALLALLKHPLARFGLEFLDLRDAANVLELAALRGGKVSPG 430
Query: 485 IMDLKSLVLDRIATQKNNTHVPHWQSRLSEEDKELAVLLVDHILQCITPLVTYKTNKNST 544
+L +L+ R+ ++ P W++ L ++ LA LL+ I + PL
Sbjct: 431 YGELPALLEARLLGTSDDDLPPAWRAGLDPDNIALARLLLQRISEAKAPL-----GAGHF 485
Query: 545 CGNLSISDWTKLTVTCLQNVCLDEHRKLPNLWFEEEGKTLSSLFSKIIETGSCIKANAIE 604
+ TV L+N+ +D+ L LW E G+ L++L +IE G+ + +A E
Sbjct: 486 EAIADLLALALDTVRALENLAIDDEGYLLALWLGEAGEKLAALLRGLIEAGA--QLSAPE 543
Query: 605 WIDIITRLIDGETVKPKIEKSSTLFILGTLESRLLNFDTLILGGLNEGVWPKNTAKNPFL 664
W DI+ L+ GETVKP + I+G LE+RL FD +++ GLNEGVWP T + FL
Sbjct: 544 WPDILDALVAGETVKPAPGTHPRVRIMGALEARLQRFDGVVIVGLNEGVWPSKTPNDLFL 603
Query: 665 SRVMQSDLNLKTAEKYIGQAAHD-FEMANGTRHLIYTRSLRENNIPTIASRWLQRLLVLG 723
SR M+ L L E+ IG AHD F+MA ++ TRS R P ++SRWL+RLL L
Sbjct: 604 SRPMRKSLGLPPPERRIGLQAHDYFQMAKNAPEVVLTRSERSGEAPAVSSRWLERLLTLL 663
Query: 724 GTDFFDNLKKRGQCYLDWTRKLDYTTKQPHYKRP 757
G + L++RG L W+R LD Q RP
Sbjct: 664 GEAGTEQLRRRGDALLHWSRLLDEGEPQAPVPRP 697