RPSBLAST alignment of GI: 254780823 and protein with PDBid: 3h4r
>3h4r_A Exodeoxyribonuclease 8; exonuclease, recombination, hydrolase; 2.80A {Escherichia coli k-12} Length = 265
Score = 49.2 bits (116), Expect = 5e-06
Identities = 34/251 (13%), Positives = 63/251 (25%), Gaps = 14/251 (5%)
Query: 770 YSFSEIKQLINDPYAVYARRILKLDFIPHFKKDPDRTDRGTLFHNIITELIK-KRINKNT 828
S S++ + + P R+ +D D GT FH + EL +
Sbjct: 13 ISKSQLDDIADTPALYLWRKNAPVDT-----TKTKTLDLGTAFHCRVLELEEFSNRFIVA 67
Query: 829 PEINHLMKQIIDSHFEKENLPPHIDII-----WRHLFHKISHSFLEHEEKIQSSIEKIFV 883
PE N + + S +
Sbjct: 68 PEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHA 127
Query: 884 NIPAKMAIESIGIHLTGFADRIDLLKSGFVDITDYKTGDNPKKETAQKLIDPQLSLEAAA 943
GI D+I +D+ K Q + +
Sbjct: 128 ESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDG 187
Query: 944 LKAGSFSQIDCRKVANLFYIRLKQKFKIDCITNDKKKYSADELSEKSLKNLIEIVTLLQN 1003
+A Q + ++ ++ ++ A + ++ +NL + L
Sbjct: 188 YEAQFGVQPTFVFLVAS-TTIECGRYPVEIFMMGEEAKLAGQ--QEYHRNLRTLSDCLNT 244
Query: 1004 GEQPFISHLRL 1014
E P I L L
Sbjct: 245 DEWPAIKTLSL 255