HHsearch alignment for GI: 254780824 and conserved domain: COG0542
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].
Probab=93.54 E-value=0.11 Score=30.90 Aligned_cols=46 Identities=22% Similarity=0.334 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHH---C----CCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 89999999999984---5----8996999987878688999999997607888
Q gi|254780824|r 16 EKNTICLGRHLASI---L----RLGDCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 16 ~~~t~~la~~la~~---l----~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 497 d~AV~~v~~aIrraRaGL~dp~rPigsFlF~GPTGVGKTELAkaLA~~Lfg~e 549 (786)
T COG0542 497 DEAVEAVSDAIRRARAGLGDPNRPIGSFLFLGPTGVGKTELAKALAEALFGDE 549 (786)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 99999999999998569999998735788667886569999999999965997