HHsearch alignment for GI: 254780824 and conserved domain: COG0593

Probab=93.65  E-value=0.26  Score=28.57  Aligned_cols=120  Identities=18%  Similarity=0.181  Sum_probs=65.4

Q ss_pred             CCCHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCC----CCCCCCHHH------HHHHCCCC-C
Q ss_conf             2998999999999998458-9969999878786889999999976078885----302452020------11003788-6
Q gi|254780824|r   13 IPNEKNTICLGRHLASILR-LGDCLTLSGDLGSGKSFLARSIIRFLMHDDA----LEVLSPTFT------LVQLYDAS-I   80 (162)
Q Consensus        13 l~~~~~t~~la~~la~~l~-~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~~----~~V~SPTF~------l~~~Y~~~-~   80 (162)
T Consensus        92 g~~N~~A~aa~~~va~~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~a~~~~~~~~Fk  171 (408)
T COG0593          92 GPSNRLAYAAAKAVAENPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVKALRDNEMEKFK  171 (408)
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77449999999998756688689579987999978999999999998629986488504899899999998850488888


Q ss_pred             CEEEEEEECCCCHH----------HHHCCCHHHHCCCC--EEEEE--CHHHHHCCCCC------CEEEEEEEE
Q ss_conf             08999865178977----------75305836750897--89999--85563204995------409999987
Q gi|254780824|r   81 PVAHFDFYRLSSHQ----------EVVELGFDEILNER--ICIIE--WPEIGRSLLPK------KYIDIHLSQ  133 (162)
Q Consensus        81 ~i~H~DlYRL~~~~----------E~~~lg~~e~~~~~--i~lIE--Wpe~~~~~lp~------~~i~I~i~~  133 (162)
T Consensus       172 ~~y~~dlllIDDiq~l~gk~~~qeefFh~-FN~l~~~~kqIvltsdr~P~~l~~~~~rL~SR~~~Gl~~~I~~  243 (408)
T COG0593         172 EKYSLDLLLIDDIQFLAGKERTQEEFFHT-FNALLENGKQIVLTSDRPPKELNGLEDRLRSRLEWGLVVEIEP  243 (408)
T ss_pred             HHHCCCEEEECHHHHHCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCCCHHHCCCCHHHHHHHHCEEEEEECC
T ss_conf             76426735551386756771579999999-9988850887999707883221103588998986305775279