HHsearch alignment for GI: 254780824 and conserved domain: COG1484

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=93.63  E-value=0.23  Score=28.97  Aligned_cols=46  Identities=28%  Similarity=0.330  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             8999999999998458996999987878688999999997607888
Q gi|254780824|r   16 EKNTICLGRHLASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDD   61 (162)
Q Consensus        16 ~~~t~~la~~la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~   61 (162)
T Consensus        88 ~~~~l~~~~~~~~~~~~~~nl~l~G~~G~GKthLa~Ai~~~l~~~g  133 (254)
T COG1484          88 DKKALEDLASLVEFFERGENLVLLGPPGVGKTHLAIAIGNELLKAG  133 (254)
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf             6999999999998732588289989999879999999999999839