HHsearch alignment for GI: 254780824 and conserved domain: PRK05342
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=93.05 E-value=0.12 Score=30.67 Aligned_cols=37 Identities=35% Similarity=0.405 Sum_probs=28.1
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 69999878786889999999976078885302452020
Q gi|254780824|r 34 DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFT 71 (162)
Q Consensus 34 ~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~ 71 (162)
T Consensus 110 sNILliGPTG~GKTlla~tLAk~l~vPF~-iaDAT~lT 146 (411)
T PRK05342 110 SNILLIGPTGSGKTLLAQTLARILNVPFA-IADATTLT 146 (411)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEE-EEEECEEC
T ss_conf 53899899997788999999998699989-98612001