HHsearch alignment for GI: 254780824 and conserved domain: PRK05563
>PRK05563 DNA polymerase III subunits gamma and tau; Validated.
Probab=94.70 E-value=0.067 Score=32.17 Aligned_cols=135 Identities=12% Similarity=0.151 Sum_probs=71.3
Q ss_pred HHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCH--HHHHHHCC-C-CCCEEEEEEECCCCHH
Q ss_conf 999999845899---699998787868899999999760788853024520--20110037-8-8608999865178977
Q gi|254780824|r 22 LGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPT--FTLVQLYD-A-SIPVAHFDFYRLSSHQ 94 (162)
Q Consensus 22 la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPT--F~l~~~Y~-~-~~~i~H~DlYRL~~~~ 94 (162)
T Consensus 24 v~~~L~n~i~~~~i~hayLf~GprG~GKTs~Ari~akalnc~~~~-~~~pC~~C~~C~~i~~g~~~Dv~Eidaas~~gvd 102 (541)
T PRK05563 24 ITTTLKNQIINNRIAHAYLFCGTRGTGKTSTAKIFAKAVNCLNPQ-DGEPCNECEICKKINEGLLMDVIEIDAASNNGVD 102 (541)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHH
T ss_conf 999999999849932045303879958999999999995799988-8985751488999856898873662444447889
Q ss_pred HHHCCCHHHH-CC-----CCEEEEECHHHHHC--------C---CCCCEEEEEEEECCC-------EEE--EEEE--ECC
Q ss_conf 7530583675-08-----97899998556320--------4---995409999987398-------769--9999--586
Q gi|254780824|r 95 EVVELGFDEI-LN-----ERICIIEWPEIGRS--------L---LPKKYIDIHLSQGKT-------GRK--ATIS--AER 146 (162)
Q Consensus 95 E~~~lg~~e~-~~-----~~i~lIEWpe~~~~--------~---lp~~~i~I~i~~~~~-------~R~--i~i~--~~~ 146 (162)
T Consensus 103 ~iR~~-~~~~~~~p~~~~~Kv~IiDEvhmls~~a~nallKtlEePp~~~~Filatte~~ki~~tI~SRcq~f~f~~i~~~ 181 (541)
T PRK05563 103 DIREI-IENVKYPPQEGKYKVYIMDEVHMLSQGAVNAFLKTLEEPPSNVIFILATTDPQKLPITILSRCQRFDFKRIKVK 181 (541)
T ss_pred HHHHH-HHHCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHEEEEEEEECCHH
T ss_conf 99999-97610487678705999977233899999999999854877756999769844274556742135775438999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 089999999998
Q gi|254780824|r 147 WIISHINQMNRS 158 (162)
Q Consensus 147 ~~~~~l~~~~~~ 158 (162)
T Consensus 182 ~i~~~L~~I~~~ 193 (541)
T PRK05563 182 DIFKRLRKIVEE 193 (541)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999998