HHsearch alignment for GI: 254780824 and conserved domain: PRK05648
>PRK05648 DNA polymerase III subunits gamma and tau; Reviewed.
Probab=95.26 E-value=0.028 Score=34.45 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=54.2
Q ss_pred HHHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC------C-CC-CCEEEEEEEC
Q ss_conf 9999999845899---6999987878688999999997607888530245202011003------7-88-6089998651
Q gi|254780824|r 21 CLGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLY------D-AS-IPVAHFDFYR 89 (162)
Q Consensus 21 ~la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y------~-~~-~~i~H~DlYR 89 (162)
T Consensus 23 ~~~~~l~~~~~~~~~~~a~l~~g~rg~gkt~~ar~~ak~lnc~~-----~~~~~pc~~c~~c~~i~~~~~~d~~e~d~as 97 (705)
T PRK05648 23 HVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAKCLNCET-----GVSSTPCGECSVCREIDEGRFVDLIEVDAAS 97 (705)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCCCCEEEECCCC
T ss_conf 99999999997098630465007898889899999999867789-----9988978776004666248977634451554
Q ss_pred CCCHHHHHCCCHHH--HCC----CCEEEEECHHHH
Q ss_conf 78977753058367--508----978999985563
Q gi|254780824|r 90 LSSHQEVVELGFDE--ILN----ERICIIEWPEIG 118 (162)
Q Consensus 90 L~~~~E~~~lg~~e--~~~----~~i~lIEWpe~~ 118 (162)
T Consensus 98 ~~~v~~~r~~-~~~~~~~p~~~~~kv~~idevhml 131 (705)
T PRK05648 98 RTKVEDTREL-LDNVQYAPTRGRYKVYLIDEVHML 131 (705)
T ss_pred CCCHHHHHHH-HHHCCCCCCCCCEEEEEEEHHHHC
T ss_conf 4788999999-985551776774579998426541