HHsearch alignment for GI: 254780824 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=96.53 E-value=0.017 Score=35.76 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=78.6
Q ss_pred HHHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC-------C-CCCEEEEEEEC
Q ss_conf 9999999845899---69999878786889999999976078885302452020110037-------8-86089998651
Q gi|254780824|r 21 CLGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD-------A-SIPVAHFDFYR 89 (162)
Q Consensus 21 ~la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~-------~-~~~i~H~DlYR 89 (162)
T Consensus 28 ~~~~~l~n~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~-~~~~~~~~c~~c~~c~~i~~~~~~dv~EiDaas 106 (507)
T PRK06645 28 VLVKVLSYTILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALI-TENTTIKTCEKCTNCISFNNHNHPDIIEIDAAS 106 (507)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 9999999999739966347745879978899999999996799988-889988888887678998658999859963788
Q ss_pred CCCHHHHHCCCHHH--HCC----CCEEEEECHHHHH--------CC---CCCCEEEEEEEECCC-------EEEEEEE--
Q ss_conf 78977753058367--508----9789999855632--------04---995409999987398-------7699999--
Q gi|254780824|r 90 LSSHQEVVELGFDE--ILN----ERICIIEWPEIGR--------SL---LPKKYIDIHLSQGKT-------GRKATIS-- 143 (162)
Q Consensus 90 L~~~~E~~~lg~~e--~~~----~~i~lIEWpe~~~--------~~---lp~~~i~I~i~~~~~-------~R~i~i~-- 143 (162)
T Consensus 107 ~~gv~~ir~l-~~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEepp~~~~Fi~atte~~kip~ti~srcq~f~~~ 185 (507)
T PRK06645 107 KTSVDDIRRI-IESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKIPATIISRCQRYDLR 185 (507)
T ss_pred CCCHHHHHHH-HHHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHCEEEEEE
T ss_conf 8888999999-863551787674358995214224899999999974278644389997485364837888543278754
Q ss_pred --ECCHHHHHHHHHHHH
Q ss_conf --586089999999998
Q gi|254780824|r 144 --AERWIISHINQMNRS 158 (162)
Q Consensus 144 --~~~~~~~~l~~~~~~ 158 (162)
T Consensus 186 ~i~~~~i~~~l~~i~~~ 202 (507)
T PRK06645 186 RLSFEEIFKLLEYITKQ 202 (507)
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 59979999999999997