HHsearch alignment for GI: 254780824 and conserved domain: PRK06647

>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.83  E-value=0.044  Score=33.29  Aligned_cols=133  Identities=21%  Similarity=0.206  Sum_probs=72.5

Q ss_pred             HHHHHHHHHCCCCC---EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH------HHCC-C-CCCEEEEEEEC
Q ss_conf             99999998458996---999987878688999999997607888530245202011------0037-8-86089998651
Q gi|254780824|r   21 CLGRHLASILRLGD---CLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLV------QLYD-A-SIPVAHFDFYR   89 (162)
Q Consensus        21 ~la~~la~~l~~g~---ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~------~~Y~-~-~~~i~H~DlYR   89 (162)
T Consensus        23 ~vv~~L~nai~~~rl~HAyLFsGprG~GKTt~ArilAk~LnC~~-----~~~~~PCg~C~sC~~i~~g~~~DviEidaas   97 (560)
T PRK06647         23 FVVETLKHSIEKNKIANAYIFSGPRGVGKTSSARAFARCLNCVN-----GPTIMPCGECFSCKSIDNDSSLDVIEIDGAS   97 (560)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCCCCEEEECCCC
T ss_conf             99999999997499774366328998789999999999965999-----9998888788788887459998757643645


Q ss_pred             CCCHHHHHCCCHHHH-CC-----CCEEEEECHHHHHC--------C---CCCCEEEEEEEECCC-------EEEEEEE--
Q ss_conf             789777530583675-08-----97899998556320--------4---995409999987398-------7699999--
Q gi|254780824|r   90 LSSHQEVVELGFDEI-LN-----ERICIIEWPEIGRS--------L---LPKKYIDIHLSQGKT-------GRKATIS--  143 (162)
Q Consensus        90 L~~~~E~~~lg~~e~-~~-----~~i~lIEWpe~~~~--------~---lp~~~i~I~i~~~~~-------~R~i~i~--  143 (162)
T Consensus        98 n~~VddIR~l-~e~v~~~P~~~~yKV~IIDEahmLt~~A~NALLKtLEEPP~~~~FILaTte~~KI~~TI~SRCQ~f~Fk  176 (560)
T PRK06647         98 NTSVQDVRQI-KEEIMFPPASSRYRVYIIDEVHMLSNSAFNALLKTIEEPPPYIVFIFATTEVHKLPATIKSRCQHFNFR  176 (560)
T ss_pred             CCCHHHHHHH-HHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCHHHHHHHHEEEECC
T ss_conf             4888999999-998632876687069996465655999999999986348875599997799476848999651041055


Q ss_pred             --ECCHHHHHHHHHHHHH
Q ss_conf             --5860899999999986
Q gi|254780824|r  144 --AERWIISHINQMNRST  159 (162)
Q Consensus       144 --~~~~~~~~l~~~~~~~  159 (162)
T Consensus       177 ~i~~~~I~~~L~~I~~~E  194 (560)
T PRK06647        177 LLSLEKIYEMLKKVCLED  194 (560)
T ss_pred             CCCHHHHHHHHHHHHHHC
T ss_conf             599999999999999867