HHsearch alignment for GI: 254780824 and conserved domain: PRK06872
>PRK06872 DNA polymerase III subunits gamma and tau; Provisional.
Probab=95.58 E-value=0.066 Score=32.19 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=54.5
Q ss_pred HHHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC-------CC-CCEEEEEEEC
Q ss_conf 9999999845899---69999878786889999999976078885302452020110037-------88-6089998651
Q gi|254780824|r 21 CLGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD-------AS-IPVAHFDFYR 89 (162)
Q Consensus 21 ~la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~-------~~-~~i~H~DlYR 89 (162)
T Consensus 23 ~v~~~l~~a~~~~r~~haylf~g~rg~gktt~ari~ak~lnc~~-----~~~~~pcg~c~~c~~i~~g~~~d~~eidaas 97 (696)
T PRK06872 23 HILTALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAKGLNCVH-----GVTATPCGECENCKAIEEGNFIDLIEIDAAS 97 (696)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 99999999997198630475117898888899999999867899-----9999978886225767447877546750565
Q ss_pred CCCHHHHHCCCHHH--HCC----CCEEEEECHHH
Q ss_conf 78977753058367--508----97899998556
Q gi|254780824|r 90 LSSHQEVVELGFDE--ILN----ERICIIEWPEI 117 (162)
Q Consensus 90 L~~~~E~~~lg~~e--~~~----~~i~lIEWpe~ 117 (162)
T Consensus 98 ~~~v~~~r~l-~~~~~~~p~~~~~kvy~idevhm 130 (696)
T PRK06872 98 RTKVEDTREL-LDNVQYKPVVGRFKVYLIDEVHM 130 (696)
T ss_pred CCCHHHHHHH-HHHCCCCCCCCCEEEEEEEHHHH
T ss_conf 5788999999-98454577677547999700544