HHsearch alignment for GI: 254780824 and conserved domain: PRK08533
>PRK08533 flagellar accessory protein FlaH; Reviewed.
Probab=96.63 E-value=0.0022 Score=41.17 Aligned_cols=43 Identities=21% Similarity=0.357 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 9999999998458996999987878688999999997607888
Q gi|254780824|r 19 TICLGRHLASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 19 t~~la~~la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 10 ~d~ld~~lggGip~gs~~li~G~~GtGKsi~~~~~~~~~l~~g 52 (230)
T PRK08533 10 GDELHKRLGGGIPFGSIILIEGDESTGKSILSQRLAYGFLQNG 52 (230)
T ss_pred CHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 1357887178988984899986899878999999999998789