HHsearch alignment for GI: 254780824 and conserved domain: PRK08770

Probab=95.10  E-value=0.12  Score=30.64  Aligned_cols=94  Identities=18%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             HHHHHHHHHCCCC---CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH---HHHHCC-CC-CCEEEEEEECCCC
Q ss_conf             9999999845899---69999878786889999999976078885302452020---110037-88-6089998651789
Q gi|254780824|r   21 CLGRHLASILRLG---DCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFT---LVQLYD-AS-IPVAHFDFYRLSS   92 (162)
Q Consensus        21 ~la~~la~~l~~g---~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~---l~~~Y~-~~-~~i~H~DlYRL~~   92 (162)
T Consensus        23 ~~~~~l~~~~~~~~~~~a~lf~g~rg~gkt~~ar~~a~~lnc~~~--~~~~pc~~c~~c~~i~~~~~~d~~e~daas~~~  100 (663)
T PRK08770         23 HVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSLNCETG--TSADPCGQCPACLDIDAGRYIDLLEIDAASNTG  100 (663)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf             999999999970997404762279988888999999998678999--999978778778988548988658864676588


Q ss_pred             HHHHHCCCHHH--HCC-C---CEEEEECHHH
Q ss_conf             77753058367--508-9---7899998556
Q gi|254780824|r   93 HQEVVELGFDE--ILN-E---RICIIEWPEI  117 (162)
Q Consensus        93 ~~E~~~lg~~e--~~~-~---~i~lIEWpe~  117 (162)
T Consensus       101 v~~~r~~-~~~~~~~p~~~~~kvy~idevhm  130 (663)
T PRK08770        101 VDDVREV-IENAQYMPSRGKFKVYLIDEVHM  130 (663)
T ss_pred             HHHHHHH-HHHCCCCCCCCCEEEEEEECHHH
T ss_conf             8999999-98443588777436999700433