HHsearch alignment for GI: 254780824 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=93.09 E-value=0.34 Score=27.86 Aligned_cols=51 Identities=24% Similarity=0.341 Sum_probs=38.2
Q ss_pred ECCCHHHHHHH--HHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 82998999999--9999984-589969999878786889999999976078885
Q gi|254780824|r 12 PIPNEKNTICL--GRHLASI-LRLGDCLTLSGDLGSGKSFLARSIIRFLMHDDA 62 (162)
Q Consensus 12 ~l~~~~~t~~l--a~~la~~-l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~~ 62 (162)
T Consensus 77 ~~~~~~~~~a~~~a~~~~~~F~~~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~ 130 (248)
T PRK12377 77 QVQNDGQRYALSQAKSIADELMTGCTNFVFSGKPGTGKNHLAAAIGNRLLAKGR 130 (248)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 457878999999999999987318860899899998788999999999998799