HHsearch alignment for GI: 254780824 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=93.78 E-value=0.12 Score=30.69 Aligned_cols=31 Identities=26% Similarity=0.208 Sum_probs=25.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 9969999878786889999999976078885
Q gi|254780824|r 32 LGDCLTLSGDLGSGKSFLARSIIRFLMHDDA 62 (162)
Q Consensus 32 ~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~~ 62 (162)
T Consensus 27 ~k~i~li~G~NG~GKTTll~Ai~~~LYG~~~ 57 (650)
T TIGR03185 27 PKPIILIGGLNGAGKTTLLDAIQLGLYGKRA 57 (650)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 9987999779999789999999999569510