HHsearch alignment for GI: 254780824 and conserved domain: TIGR03269
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=95.52 E-value=0.015 Score=36.17 Aligned_cols=28 Identities=29% Similarity=0.551 Sum_probs=15.4
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 5899699998787868899999999760
Q gi|254780824|r 30 LRLGDCLTLSGDLGSGKSFLARSIIRFL 57 (162)
Q Consensus 30 l~~g~ii~L~GdLGaGKTtfvr~i~~~l 57 (162)
T Consensus 307 v~~GEi~gi~G~nGsGKsTL~k~l~Gl~ 334 (520)
T TIGR03269 307 VKEGEIFGIVGTSGAGKTTLSKIIAGVL 334 (520)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 7289689998788887899999994887