HHsearch alignment for GI: 254780824 and conserved domain: TIGR03269

>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=95.16  E-value=0.019  Score=35.42  Aligned_cols=27  Identities=30%  Similarity=0.482  Sum_probs=24.0

Q ss_pred             HCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             458996999987878688999999997
Q gi|254780824|r   29 ILRLGDCLTLSGDLGSGKSFLARSIIR   55 (162)
Q Consensus        29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~   55 (162)
T Consensus        22 ~i~~Gei~~LvG~sGsGKSTL~~~l~G   48 (520)
T TIGR03269        22 TIEEGEVLGILGRSGAGKSVLMHVLRG   48 (520)
T ss_pred             EECCCCEEEEECCCCCHHHHHHHHHHC
T ss_conf             999998999999999699999999965