HHsearch alignment for GI: 254780824 and conserved domain: TIGR03420

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda. Members of this protein family are Hda (Homologous to DnaA). These proteins are about half the length of DnaA and homologous over length of Hda. In the model species Escherichia coli, the initiation of DNA replication requires DnaA bound to ATP rather than ADP; Hda helps facilitate the conversion of DnaA-ATP to DnaA-ADP.

Probab=94.01  E-value=0.21  Score=29.19  Aligned_cols=31  Identities=29%  Similarity=0.277  Sum_probs=26.0

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             8996999987878688999999997607888
Q gi|254780824|r   31 RLGDCLTLSGDLGSGKSFLARSIIRFLMHDD   61 (162)
Q Consensus        31 ~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~   61 (162)
T Consensus        36 ~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~   66 (226)
T TIGR03420        36 KGDRFLYLWGESGSGKSHLLQAACAAAEERG   66 (226)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf             6888699989999988999999999986269