HHsearch alignment for GI: 254780824 and conserved domain: cd01868

>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=93.58  E-value=0.23  Score=28.94  Aligned_cols=84  Identities=15%  Similarity=0.171  Sum_probs=46.4

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHH---HHCCCCCCEEEEEEECCCCHHHHHCCCHHHHCC--CCEE
Q ss_conf             99987878688999999997607888530245202011---003788608999865178977753058367508--9789
Q gi|254780824|r   36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLV---QLYDASIPVAHFDFYRLSSHQEVVELGFDEILN--ERIC  110 (162)
Q Consensus        36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~---~~Y~~~~~i~H~DlYRL~~~~E~~~lg~~e~~~--~~i~  110 (162)
T Consensus         6 iv~iGd~~VGKTsli~r~~~~~f~~~----~~~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~-~~~~~~a~~~i   80 (165)
T cd01868           6 IVLIGDSGVGKSNLLSRFTRNEFNLD----SKSTIGVEFATRSIQIDGKTIKAQIWDTAGQERYRAIT-SAYYRGAVGAL   80 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCC----CCCCCCEEEEEEEEEECCEEEEEEEEECCCCHHHHHHH-HHHHHHCCCEE
T ss_conf             99999999789999999972989998----89874478789999999999999999899972126789-98733205148


Q ss_pred             EE-------------ECHHHHHCCCCC
Q ss_conf             99-------------985563204995
Q gi|254780824|r  111 II-------------EWPEIGRSLLPK  124 (162)
Q Consensus       111 lI-------------EWpe~~~~~lp~  124 (162)
T Consensus        81 lvydit~~~Sf~~i~~w~~~i~~~~~~  107 (165)
T cd01868          81 LVYDITKKQTFENVERWLKELRDHADS  107 (165)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             986269889999999999999985557