HHsearch alignment for GI: 254780824 and conserved domain: cd02030
>cd02030 NDUO42 NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.
Probab=97.27 E-value=0.00023 Score=47.05 Aligned_cols=27 Identities=30% Similarity=0.422 Sum_probs=24.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 999987878688999999997607888
Q gi|254780824|r 35 CLTLSGDLGSGKSFLARSIIRFLMHDD 61 (162)
Q Consensus 35 ii~L~GdLGaGKTtfvr~i~~~lg~~~ 61 (162)
T Consensus 1 iI~IEGnIG~GKTTl~~~La~~l~~~~ 27 (219)
T cd02030 1 VITVDGNIASGKGKLAKELAEKLGMKY 27 (219)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 989967856799999999999859821