HHsearch alignment for GI: 254780824 and conserved domain: cd03112
>cd03112 CobW_like The function of this protein family is unkown. The amino acid sequence of YjiA protein in E. coli contains several conserved motifs that characterizes it as a P-loop GTPase. YijA gene is among the genes significantly induced in response to DNA-damage caused by mitomycin. YijA gene is a homologue of the CobW gene which encodes the cobalamin synthesis protein/P47K.
Probab=96.37 E-value=0.0029 Score=40.41 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=27.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC
Q ss_conf 9999878786889999999976078885302452020110037
Q gi|254780824|r 35 CLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTLVQLYD 77 (162)
Q Consensus 35 ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l~~~Y~ 77 (162)
T Consensus 2 v~iitGFLGaGKTTll~~lL~~~~~-------~~~avIvNEfG 37 (158)
T cd03112 2 VTVLTGFLGAGKTTLLNHILTEQHG-------RKIAVIENEFG 37 (158)
T ss_pred EEEEEECCCCCHHHHHHHHHHCCCC-------CCEEEEEECCC
T ss_conf 0899848889999999999847889-------97799970765