HHsearch alignment for GI: 254780824 and conserved domain: cd03223

>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=95.94  E-value=0.0071  Score=38.05  Aligned_cols=41  Identities=27%  Similarity=0.360  Sum_probs=30.2

Q ss_pred             HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             984589969999878786889999999976078885302452
Q gi|254780824|r   27 ASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDDALEVLSP   68 (162)
Q Consensus        27 a~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SP   68 (162)
T Consensus        21 sl~i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~~~~~-G~i~~~   61 (166)
T cd03223          21 SFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGS-GRIGMP   61 (166)
T ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCC-CEEEEC
T ss_conf             88988999999995899988999999869876998-679976