HHsearch alignment for GI: 254780824 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=96.15 E-value=0.0059 Score=38.52 Aligned_cols=31 Identities=32% Similarity=0.459 Sum_probs=27.0
Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 4589969999878786889999999976078
Q gi|254780824|r 29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 22 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p 52 (201)
T cd03231 22 TLAAGEALQVTGPNGSGKTTLLRILAGLSPP 52 (201)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 8879959999999999999999999667788