>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=95.50  E-value=0.016  Score=35.90  Aligned_cols=33  Identities=18%  Similarity=0.333  Sum_probs=27.6

Q ss_pred             HCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             458996999987878688999999997607888
Q gi|254780824|r   29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLMHDD   61 (162)
Q Consensus        29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~~   61 (162)
T Consensus        21 ti~~GEiv~liGpNGaGKSTLlk~l~Gll~p~~   53 (246)
T cd03237          21 SISESEVIGILGPNGIGKTTFIKMLAGVLKPDE   53 (246)
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf             465798999997999769999999977878886