HHsearch alignment for GI: 254780824 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.69 E-value=0.011 Score=36.86 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=26.6
Q ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 84589969999878786889999999976078
Q gi|254780824|r 28 SILRLGDCLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 28 ~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 25 l~i~~Ge~~~iiG~sGsGKTTll~~i~Gl~~p 56 (218)
T cd03255 25 LSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP 56 (218)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 99869989999999998699999999669999