HHsearch alignment for GI: 254780824 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.85 E-value=0.031 Score=34.16 Aligned_cols=32 Identities=41% Similarity=0.514 Sum_probs=27.1
Q ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 84589969999878786889999999976078
Q gi|254780824|r 28 SILRLGDCLTLSGDLGSGKSFLARSIIRFLMH 59 (162)
Q Consensus 28 ~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~ 59 (162)
T Consensus 21 l~i~~Ge~~~iiG~SGsGKSTll~~i~gL~~p 52 (235)
T cd03261 21 LDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP 52 (235)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 48879989999999997299999999759998