HHsearch alignment for GI: 254780824 and conserved domain: cd03270

>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=94.20  E-value=0.055  Score=32.66  Aligned_cols=30  Identities=30%  Similarity=0.198  Sum_probs=23.9

Q ss_conf             458996999987878688999999997607
Q gi|254780824|r   29 ILRLGDCLTLSGDLGSGKSFLARSIIRFLM   58 (162)
Q Consensus        29 ~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg   58 (162)
T Consensus        17 ~i~~Ge~~aIvG~nGsGKSTL~~~~l~~~g   46 (226)
T cd03270          17 DIPRNKLVVITGVSGSGKSSLAFDTIYAEG   46 (226)
T ss_conf             985998999987899609898361663323