HHsearch alignment for GI: 254780824 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.67 E-value=0.012 Score=36.57 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=29.2
Q ss_pred HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 99845899699998787868899999999760788
Q gi|254780824|r 26 LASILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 26 la~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 40 inl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~ 74 (257)
T cd03288 40 VKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIF 74 (257)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 38998799999999999981999999996056678