HHsearch alignment for GI: 254780824 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=95.67 E-value=0.018 Score=35.67 Aligned_cols=33 Identities=30% Similarity=0.530 Sum_probs=28.7
Q ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 845899699998787868899999999760788
Q gi|254780824|r 28 SILRLGDCLTLSGDLGSGKSFLARSIIRFLMHD 60 (162)
Q Consensus 28 ~~l~~g~ii~L~GdLGaGKTtfvr~i~~~lg~~ 60 (162)
T Consensus 29 l~i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~p~ 61 (207)
T cd03369 29 FKVKAGEKIGIVGRTGAGKSTLILALFRFLEAE 61 (207)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 898699999999999987999999999872888