HHsearch alignment for GI: 254780824 and conserved domain: pfam08477
>pfam08477 Miro Miro-like protein. Mitochondrial Rho proteins (Miro-1 and Miro-2), are atypical Rho GTPases. They have a unique domain organisation, with tandem GTP-binding domains and two EF hand domains (pfam00036), that may bind calcium. They are also larger than classical small GTPases. It has been proposed that they are involved in mitochondrial homeostasis and apoptosis.
Probab=95.05 E-value=0.083 Score=31.60 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=33.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH---HHHCCCCCCEEEEEEECCCCHHHHHCC
Q ss_conf 9998787868899999999760788853024520201---100378860899986517897775305
Q gi|254780824|r 36 LTLSGDLGSGKSFLARSIIRFLMHDDALEVLSPTFTL---VQLYDASIPVAHFDFYRLSSHQEVVEL 99 (162)
Q Consensus 36 i~L~GdLGaGKTtfvr~i~~~lg~~~~~~V~SPTF~l---~~~Y~~~~~i~H~DlYRL~~~~E~~~l 99 (162)
T Consensus 2 ivvvG~~~vGKTSLi~r~~~~~f~~~---~~~~~~~~~~~~~~~~~~~~~~~l~i~Dt~g~~~~~~~ 65 (118)
T pfam08477 2 VVVIGDKGSGKSSLLSQLVGGEFPPE---IPEEIQGDTLAVDTLEVDGDTELLHIWDFGGREELKFE 65 (118)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCC---CCCCCCCCEEEEEEEEECCCEEEEEEEECCCCHHHHHH
T ss_conf 99999899789999999983988876---66787777688899999992899999989996777666