HHsearch alignment for GI: 254780826 and conserved domain: PRK06436

Probab=94.48  E-value=0.4  Score=27.46  Aligned_cols=101  Identities=12%  Similarity=0.062  Sum_probs=64.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf             15683153899999998819809998167468876887320788999999999849602466066788774256207989
Q gi|254780826|r  391 MPRDPVQYGNILKDYIVKYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKAIFDNSIKSVPYRVDENFGFSVPLEVKGV  470 (509)
Q Consensus       391 ~~~~p~~ya~ll~~~i~~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~ai~~g~l~~~~~~~~~~f~l~iP~~~~gv  470 (509)
T Consensus       181 ~Plt~~T~~lI~~~~l~~MK~~a~lIN~a----------RG~iVde~aL~~aL~~g~i~ga---~lDV~~~EP~~~~~~l  247 (303)
T PRK06436        181 LPLTDETRGMINSKMLSLFRKGLAIINVA----------RADVVDKNDMLNFLRNHNDKYY---LSDVWWNEPIITETNP  247 (303)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEEEC----------CCCEECHHHHHHHHHHCCCEEE---EECCCCCCCCCCCCCC
T ss_conf             57865567776899998569997899927----------8654689999999981996599---9679999989987899


Q ss_pred             CHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9656497662599899999999999999999987512
Q gi|254780826|r  471 DRKLLNPRDSWNDVEAYDQKMRELLLMFENNAEKKQI  507 (509)
Q Consensus       471 ~~~~l~P~~~w~d~~~Y~~~a~~L~~~F~~Nf~~~~~  507 (509)
T Consensus       248 ~NVilTPHiAg~~t~e~~~---~~~~~a~~Ni~~fl~  281 (303)
T PRK06436        248 DNVILSPHVAGGMSGEIMQ---PAVALAFENIKNFFE  281 (303)
T ss_pred             CCEEECCCCCCCCHHHHHH---HHHHHHHHHHHHHHC
T ss_conf             9889999466457999999---999999999999987