HHsearch alignment for GI: 254780826 and conserved domain: TIGR02640

>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.

Probab=90.92  E-value=0.061  Score=32.84  Aligned_cols=73  Identities=32%  Similarity=0.251  Sum_probs=44.4

Q ss_pred             CEEEEEEECCCCCCCCCCCC----CCC---EEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCC
Q ss_conf             70279983354311122247----886---13303110215674123455532110135833351358875301103124
Q gi|254780826|r  218 EDVALFFGLSGTGKTTLSAS----VDR---FLIGDDEHGWSKEGVFNFEGGCYAKSINLSKETEPEIFSASCRFGTVLEN  290 (509)
Q Consensus       218 ~d~alfFGLSGTGKTTLS~d----~~r---~LigDDehgW~d~gvfn~EgGcYaK~i~Ls~~~EP~I~~aa~~~~ailEN  290 (509)
T Consensus        21 G~PvHl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd~eL~~~D-LvG~~~g~~~~-----------------kv~Dqfihn   82 (265)
T TIGR02640        21 GYPVHLRGPAGTGKTTLAMHVARKRDRPVVLINGDAELTTSD-LVGSYAGYTRK-----------------KVVDQFIHN   82 (265)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC-CCCCCCCCEEE-----------------EEEECCEEE
T ss_conf             886674478885568999999973689689986582326544-23154675222-----------------232012111


Q ss_pred             CEECCCC-CEECCCCCCCC
Q ss_conf             0057898-11114788676
Q gi|254780826|r  291 VVVDECG-IPNFKDSSVTE  308 (509)
Q Consensus       291 V~~d~~~-~~df~d~s~Te  308 (509)
T Consensus        83 V~K~~d~~~~~W~D~rLt~  101 (265)
T TIGR02640        83 VVKLEDIVRQNWVDNRLTL  101 (265)
T ss_pred             EECCCCCCCCCCCCCHHHH
T ss_conf             3425122002667835789