HHSEARCH alignment of GI: 254780826 and SCOP domain: d1j3ba1

Alignment
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=974.31  Aligned_cols=305  Identities=58%  Similarity=1.003  Sum_probs=299.8

Q ss_pred             EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             79931245347778702799833543111222478861330311021567412345553211013583335135887530
Q gi|254780826|r  204 IMPMHCSINMDKEKEDVALFFGLSGTGKTTLSASVDRFLIGDDEHGWSKEGVFNFEGGCYAKSINLSKETEPEIFSASCR  283 (509)
Q Consensus       204 ~lpmHcsan~~~~~~d~alfFGLSGTGKTTLS~d~~r~LigDDehgW~d~gvfn~EgGcYaK~i~Ls~~~EP~I~~aa~~  283 (509)
                      +||||||||+|+++ ||+||||||||||||||+||+|.|||||||+|+++||||||||||||||+|+++.||+||+|+.+
T Consensus         1 ~lpmh~san~~~~~-~valffGLSGTGKTTLs~~~~r~ligDDe~~w~~~gv~~~EgGcyaKt~~L~~~~ep~i~~a~~~   79 (318)
T d1j3ba1           1 VFPMHASANVGKEG-DVAVFFGLSGTGKTTLSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSPEHEPLIYKASNQ   79 (318)
T ss_dssp             CEEEECEEEECTTC-CEEEEEECTTSCHHHHTCBTTBCEEESSEEEECSSCEEESCSEEEEECTTCCTTTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCC-CEEEEECCCCCCCCCCCCCCCCEEECCCCEEECCCCEEEECCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             96504430048999-88999736879814221079815773762367588736512641444324576688004999986


Q ss_pred             CCHHHCCCEECCCC-CEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHH
Q ss_conf             11031240057898-11114788676705898600043100025678872699960267788760444185889999974
Q gi|254780826|r  284 FGTVLENVVVDECG-IPNFKDSSVTENTRAAYPLNFIHNHAPQSIGKHPKHVIMLAADAFGVLPPVAYLNPEKAVYYFLS  362 (509)
Q Consensus       284 ~~ailENV~~d~~~-~~df~d~s~TeNtR~~yp~~~i~n~~~~~~~~~p~~iifl~~d~~gvlPpvsklt~~qa~~~F~s  362 (509)
                      |+|++|||++|+++ +|||+|.|+|+|||++|||++|+|++.++.++||++|||||||||||||||||||++||||||||
T Consensus        80 ~~ailENV~~d~~~~~vdf~d~s~t~N~R~~yp~~~i~n~~~~~~~~~p~~iifLt~Da~GVLPPvskLt~eQa~~~F~s  159 (318)
T d1j3ba1          80 FEAILENVVVNPESRRVQWDDDSKTENTRSSYPIAHLENVVESGVAGHPRAIFFLSADAYGVLPPIARLSPEEAMYYFLS  159 (318)
T ss_dssp             TTCEEESCEECTTTCCEETTCCSSCSCCEEEEEGGGCSSBCTTSEECCEEEEEEEECCTTSCSCSEEEECHHHHHHHHHH
T ss_pred             HHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHH
T ss_conf             44323025980677522235776667521773657622221124378874368985273347771310189999999998


Q ss_pred             HCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             23245666200012565312100105001568315389999999881980999816746887688732078899999999
Q gi|254780826|r  363 GYTAKVAGTEKGVLKPEATFSACFGAPFMPRDPVQYGNILKDYIVKYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKA  442 (509)
Q Consensus       363 GyT~k~agte~g~~ep~~tfs~cFg~PF~~~~p~~ya~ll~~~i~~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~a  442 (509)
                      |||+|+||||+|++||++|||+|||+||||+||++||++|++||++|+++||||||||+||+||+|+||+|++||+||+|
T Consensus       160 GyT~k~agtE~g~~ep~~tfs~cfg~PFl~~~p~~ya~lL~~ki~~~~~~~~LvNTGW~Gg~yg~G~Ri~l~~TR~ii~a  239 (318)
T d1j3ba1         160 GYTARVAGTERGVTEPRATFSACFGAPFLPMHPGVYARMLGEKIRKHAPRVYLVNTGWTGGPYGVGYRFPLPVTRALLKA  239 (318)
T ss_dssp             CEEEEC---------CEEEECGGGCGGGCSSCHHHHHHHHHHHHHHHCCEEEEEECSEESSSTTTSEECCHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             87642257764433566514200121015437556899999999866974899704534555556885780436999999


Q ss_pred             HHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             9849602466066788774256207989965649766259989999999999999999998751279
Q gi|254780826|r  443 IFDNSIKSVPYRVDENFGFSVPLEVKGVDRKLLNPRDSWNDVEAYDQKMRELLLMFENNAEKKQIKI  509 (509)
Q Consensus       443 i~~g~l~~~~~~~~~~f~l~iP~~~~gv~~~~l~P~~~w~d~~~Y~~~a~~L~~~F~~Nf~~~~~~v  509 (509)
                      |++|+|++++|+.||+|||+||++|+|||+++|+||++|+|+++|+++|++|+++|++||+||++.|
T Consensus       240 Il~G~l~~~e~~~d~~Fgl~IP~~v~gV~~~iL~Pr~~W~d~~~Yd~~a~~L~~~F~eNFkkf~~~~  306 (318)
T d1j3ba1         240 ALSGALENVPYRRDPVFGFEVPLEAPGVPQELLNPRETWADKEAYDQQARKLARLFQENFQKYASGV  306 (318)
T ss_dssp             HHHTGGGGSCEEECTTTCCEEESCBTTBCGGGGCGGGGSSCHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHCCCCCCCCEEECCCCCEECCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9739655641587587785410468999857679857369999999999999999999999755478


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: PEP carboxykinase C-terminal domain
domain: Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase)
species: Thermus thermophilus [TaxId: 274]