HHSEARCH alignment of GI: 254780826 and SCOP domain: d2olra1

Alignment
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=956.28  Aligned_cols=298  Identities=49%  Similarity=0.838  Sum_probs=291.0

Q ss_pred             EEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             79931245347778702799833543111222478861330311021567412345553211013583335135887530
Q gi|254780826|r  204 IMPMHCSINMDKEKEDVALFFGLSGTGKTTLSASVDRFLIGDDEHGWSKEGVFNFEGGCYAKSINLSKETEPEIFSASCR  283 (509)
Q Consensus       204 ~lpmHcsan~~~~~~d~alfFGLSGTGKTTLS~d~~r~LigDDehgW~d~gvfn~EgGcYaK~i~Ls~~~EP~I~~aa~~  283 (509)
                      +||||||||+|+++ ||+||||||||||||||+||+|.|||||||+|+++||||||||||||||+||++.||+||+| ++
T Consensus         1 i~~mhcsan~~~~~-~~alfFGLSGTGKTTLs~d~~r~ligDDe~~w~~~gv~n~EggcYaKt~~L~~~~ep~i~~a-~~   78 (313)
T d2olra1           1 IASMHCSANVGEKG-DVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIKLSKEAEPEIYNA-IR   78 (313)
T ss_dssp             CEEECEEEEECTTS-CEEEEECSTTSSHHHHHCCTTSEEEESSCEEEETTEEEESCSEEEEECTTCCTTTSHHHHHT-CS
T ss_pred             CCCEECCCCCCCCC-CEEEEECCCCCCCCCCEECCCCCEECCCEEEECCCCEEEECCCCEEECCCCCCCCCHHHHHH-HH
T ss_conf             94550131048889-88999704779856023279972145865563588736403642200103475577248888-63


Q ss_pred             CCHHHCCCEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCC-CCCCCCCEEEEEECCCCCCCCHHHHCCHHHHHHHHHH
Q ss_conf             110312400578981111478867670589860004310002-5678872699960267788760444185889999974
Q gi|254780826|r  284 FGTVLENVVVDECGIPNFKDSSVTENTRAAYPLNFIHNHAPQ-SIGKHPKHVIMLAADAFGVLPPVAYLNPEKAVYYFLS  362 (509)
Q Consensus       284 ~~ailENV~~d~~~~~df~d~s~TeNtR~~yp~~~i~n~~~~-~~~~~p~~iifl~~d~~gvlPpvsklt~~qa~~~F~s  362 (509)
                      ++||+|||++|++|+|||+|.|+|+|||++|||++|+|++.+ +.++||++|||||||||||||||||||++||||||||
T Consensus        79 ~~avlENV~~d~~~~vdf~d~s~t~N~R~~yp~~~i~n~~~~~~~~~~p~~iifLt~Da~GvlPPvskLt~~QA~y~Fls  158 (313)
T d2olra1          79 RDALLENVTVREDGTIDFDDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLS  158 (313)
T ss_dssp             TTCEEESCEECTTSCEETTCCSSCSCCEEEEEGGGSSSBCCSSSEESCEEEEEEEECCTTSCSCSEEECCHHHHHHHHHH
T ss_pred             HCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHH
T ss_conf             17376325987787411467655666653324201444347633478875366630473125781024078999999986


Q ss_pred             HCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             23245666200012565312100105001568315389999999881980999816746887688732078899999999
Q gi|254780826|r  363 GYTAKVAGTEKGVLKPEATFSACFGAPFMPRDPVQYGNILKDYIVKYCVDCWLVNTGWTAGSYGEGYRMPLSVTRALLKA  442 (509)
Q Consensus       363 GyT~k~agte~g~~ep~~tfs~cFg~PF~~~~p~~ya~ll~~~i~~~~~~vyLvNTGw~Gg~~g~G~Ri~l~~Tr~ii~a  442 (509)
                      |||+|+||||+|++||++|||+|||+||||+||.+||+||++||++|+++||||||||+|    +|+||+|++||+||+|
T Consensus       159 GyTak~agtE~gv~ep~~tfs~cfg~PFl~~~p~~ya~lL~~ki~~~~~~v~LvNTGw~G----~G~Ri~l~~TR~ii~a  234 (313)
T d2olra1         159 GFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNG----TGKRISIKDTRAIIDA  234 (313)
T ss_dssp             CEEEEETTGGGTCCCEEEEECGGGCGGGCSSCHHHHHHHHHHHHHHHTCEEEEEECSBCT----TSSBCCHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC----CCCCCCHHHHHHHHHH
T ss_conf             201013676644557765164325654556667889999999987469728998156557----8874777899999999


Q ss_pred             HHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             98496024660667887742562079899656497662599899999999999999999987512
Q gi|254780826|r  443 IFDNSIKSVPYRVDENFGFSVPLEVKGVDRKLLNPRDSWNDVEAYDQKMRELLLMFENNAEKKQI  507 (509)
Q Consensus       443 i~~g~l~~~~~~~~~~f~l~iP~~~~gv~~~~l~P~~~w~d~~~Y~~~a~~L~~~F~~Nf~~~~~  507 (509)
                      |++|+|++++|+.||+|||+||++|||||+++||||++|.|+++|+++|++|+++|++||+||++
T Consensus       235 i~~G~l~~~e~~~dp~Fgl~IP~~~~GV~~~iLnPr~tW~d~~~Yd~~a~~La~~F~eNFkkf~~  299 (313)
T d2olra1         235 ILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQEKAETLAKLFIDNFDKYTD  299 (313)
T ss_dssp             HHHTHHHHSCEEEETTTTEEEESCCTTSCGGGGSGGGGSSSHHHHHHHHHHHHHHHHHHHGGGTT
T ss_pred             HHHCCCCCCCEEECCCCCEEEEEECCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             98522354435742644655232448987444698563589999999999999999999985067


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: PEP carboxykinase C-terminal domain
domain: Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase)
species: Escherichia coli [TaxId: 562]