HHsearch alignment for GI: 254780827 and conserved domain: CHL00095

Probab=94.35  E-value=0.3  Score=28.23  Aligned_cols=94  Identities=15%  Similarity=0.184  Sum_probs=47.1

Q ss_pred             CCCHHHHHHHHCCCCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHCCCCCCCCCE-EEEEECCCC
Q ss_conf             889899998744888468999----9999899999999999999998999-----998716776678767-999527866
Q gi|254780827|r   24 ILSKKISNQLLSFDSPIDSTE----IYKIYFPLSHLLLINVNSAKITCHQ-----YNKFLNLKEESKIPF-VVGITGSVA   93 (311)
Q Consensus        24 ~l~~~~~~~l~~~~d~i~~~e----v~~iy~pl~~ll~~~~~~~~~~~~~-----~~~fl~~~~~~k~Pf-IIGIAG~~a   93 (311)
T Consensus       471 ~v~~~dI~~vvs~~tgiPv~~~~~~e~~~l~~le~~L~~~ViGQd~AI~~vs~ai~rsraGl~-~~~rPigsFlf~GPTG  549 (823)
T CHL00095        471 VVTEKDIAEIVSAWTGIPVNKLTKSESEKLIHMEETLHKRIIGQDEAVVAVSKAIRRARVGLK-NPNRPIASFIFCGPTG  549 (823)
T ss_pred             CCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC-CCCCCCEEEEEECCCC
T ss_conf             207999999999986898476334588999878887877840769999999999999970899-8999746899878998


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             6733799999999973389868999508
Q gi|254780827|r   94 VGKSTFARILCILLQQISNFKVSLITTD  121 (311)
Q Consensus        94 sGKST~Ar~L~~lL~~~~~~~V~lis~D  121 (311)
T Consensus       550 vGKTElAK~LA~~L--Fg-~e~~liR~D  574 (823)
T CHL00095        550 VGKTELTKALASYF--FG-SEEAMIRLD  574 (823)
T ss_pred             CCHHHHHHHHHHHH--CC-CCCCEEEEC
T ss_conf             87799999999997--47-820258853