HHsearch alignment for GI: 254780827 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=97.91 E-value=0.00011 Score=51.66 Aligned_cols=136 Identities=21% Similarity=0.297 Sum_probs=80.2
Q ss_pred CCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH-------CHHHCCCC--HHHHHHH
Q ss_conf 67876-79995278666733799999999973389868999508875882688760-------00201898--1331289
Q gi|254780827|r 79 ESKIP-FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTAN-------NLMQRKGF--PESYDSN 148 (311)
Q Consensus 79 ~~k~P-fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~-------~l~~rkGf--PeS~D~~ 148 (311)
T Consensus 8 ~~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~--~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ 85 (202)
T COG0378 8 EKNRPMLRIGVGGPPGSGKTALIEKTLRALKD--EYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLE 85 (202)
T ss_pred HHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH--HCCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 72586489996179986789999999999975--2776899640400655999973779806874038765886788999
Q ss_pred HHHHHHHHHH--------CCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCC----
Q ss_conf 9999999741--------2664058740443225658983699868965997061003576545757774010002----
Q gi|254780827|r 149 KLLTFLSDVK--------SGKKKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDF---- 216 (311)
Q Consensus 149 ~L~~~L~~lK--------~G~~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~---- 216 (311)
T Consensus 86 ai~~l~~~~~~~Dll~iEs~G-NL~~~-~sp~L~d~~--~v~Vid-----vteGe~~------P~K~gP~i~~aDllVIn 150 (202)
T COG0378 86 AIEELVLDFPDLDLLFIESVG-NLVCP-FSPDLGDHL--RVVVID-----VTEGEDI------PRKGGPGIFKADLLVIN 150 (202)
T ss_pred HHHHHHHCCCCCCEEEEECCC-CEECC-CCCCHHHCE--EEEEEE-----CCCCCCC------CCCCCCCEEEEEEEEEE
T ss_conf 999986317767789992376-43244-680413046--999998-----7888887------65579964674189985
Q ss_pred -CCEEEEEECCHHHHH
Q ss_conf -311577308899988
Q gi|254780827|r 217 -LDFSIYIDADKRDIH 231 (311)
Q Consensus 217 -fD~sIyVDad~~~i~ 231 (311)
T Consensus 151 K~DLa~~v~~dlevm~ 166 (202)
T COG0378 151 KTDLAPYVGADLEVMA 166 (202)
T ss_pred HHHHHHHHCCCHHHHH
T ss_conf 6773877286699999