HHsearch alignment for GI: 254780827 and conserved domain: COG2804
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=95.76 E-value=0.015 Score=37.03 Aligned_cols=36 Identities=28% Similarity=0.403 Sum_probs=22.7
Q ss_pred CCE-EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 767-999527866673379999999997338986899950
Q gi|254780827|r 82 IPF-VVGITGSVAVGKSTFARILCILLQQISNFKVSLITT 120 (311)
Q Consensus 82 ~Pf-IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~ 120 (311)
T Consensus 256 ~p~GliLvTGPTGSGKTTT---LY~~L~~ln~~~~nI~Ti 292 (500)
T COG2804 256 RPQGLILVTGPTGSGKTTT---LYAALSELNTPERNIITI 292 (500)
T ss_pred CCCEEEEEECCCCCCHHHH---HHHHHHHHCCCCCEEEEE
T ss_conf 8970899968999988999---999999862788508984