HHsearch alignment for GI: 254780827 and conserved domain: COG2805

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=95.45  E-value=0.02  Score=36.20  Aligned_cols=43  Identities=23%  Similarity=0.419  Sum_probs=27.1

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECC---CCCC-HHHH
Q ss_conf             999527866673379999999997338-98689995088---7588-2688
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQIS-NFKVSLITTDG---FLFP-NAVL  130 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~-~~~V~lis~Dg---F~~~-n~~l  130 (311)
T Consensus       127 LILVTGpTGSGKSTT---lAamId~iN~~~~~HIlTIEDPIE~vh~skksl  174 (353)
T COG2805         127 LILVTGPTGSGKSTT---LAAMIDYINKHKAKHILTIEDPIEYVHESKKSL  174 (353)
T ss_pred             EEEEECCCCCCHHHH---HHHHHHHHHCCCCCCEEEECCCHHHHHCCHHHH
T ss_conf             699867999967879---999999984147751687237468650432766