HHsearch alignment for GI: 254780827 and conserved domain: COG4240
>COG4240 Predicted kinase [General function prediction only].
Probab=99.91 E-value=3.5e-22 Score=170.08 Aligned_cols=209 Identities=23% Similarity=0.276 Sum_probs=154.1
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH-----HCHHHCCCCHHHHHHHHHHHH
Q ss_conf 678767999527866673379999999997338986899950887588268876-----000201898133128999999
Q gi|254780827|r 79 ESKIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTA-----NNLMQRKGFPESYDSNKLLTF 153 (311)
Q Consensus 79 ~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~-----~~l~~rkGfPeS~D~~~L~~~ 153 (311)
T Consensus 46 e~grPli~gisGpQGSGKStls~~i~~~L~~kg~ert~~lSLDDlYlthadrl~La~q~npllq~RGlpGTHD~tlglnV 125 (300)
T COG4240 46 ERGRPLIVGISGPQGSGKSTLSALIVRLLAAKGLERTATLSLDDLYLTHADRLRLARQVNPLLQTRGLPGTHDPTLGLNV 125 (300)
T ss_pred HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHH
T ss_conf 12796399852688876535999999999973653068866455310438999998733804302699987761789999
Q ss_pred HHHHHCCCCEEEEECCCC----CCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCC------------CCCCE-E----
Q ss_conf 997412664058740443----22565898369986896599706100357654575------------77740-1----
Q gi|254780827|r 154 LSDVKSGKKKVAVPRYSH----SQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDN------------QKATP-M---- 212 (311)
Q Consensus 154 L~~lK~G~~~V~~PvYsh----~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~------------~~~~~-~---- 212 (311)
T Consensus 126 Lnai~~g~~~V~lPrfDKS~f~gagDR~p~~q~ik~~vdivIlEGWfvGfrPidp~ll~~p~n~l~~~ed~a~~~dvN~k 205 (300)
T COG4240 126 LNAIARGGPTVPLPRFDKSAFAGAGDRAPQTQWIKFEVDIVILEGWFVGFRPIDPELLAAPVNALEAAEDGAWRADVNDK 205 (300)
T ss_pred HHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCEECCEEEEEEEEEEEECCCCCHHHHCCCCCCCHHHCCCCHHHHHHHH
T ss_conf 99996589986666544020157787898654122120499985006412448999937988630221132278887755
Q ss_pred ------ECCCCCEEEEEECCH-HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------000231157730889-9988799887888766520167779988605998999999999988631668999520
Q gi|254780827|r 213 ------ISDFLDFSIYIDADK-RDIHRWYLNRFLKLRETAFLNPRSYFHHFTEISEEQSLKIAETAWNNINLPNLQHNIL 285 (311)
Q Consensus 213 ------vsD~fD~sIyVDad~-~~i~~wyi~Rf~~lr~~a~~~~~s~~~~y~~l~~~ea~~~a~~iW~~in~pnl~e~I~ 285 (311)
T Consensus 206 La~Y~pL~~rIdsLillta~din~vy~WRlQqEhkliAr----------~~kgmsdeqv~efvn~ymrs-----l~lylq 270 (300)
T COG4240 206 LAPYRPLFDRIDSLILLTAPDINTVYAWRLQQEHKLIAR----------LAKGMSDEQVSEFVNAYMRS-----LELYLQ 270 (300)
T ss_pred HHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHH----------HHCCCCHHHHHHHHHHHHHH-----HHHHHH
T ss_conf 201078999863425742551488999988878999998----------86368688899999988899-----999998
Q ss_pred HHHCCC----EEEEECCCCCC
Q ss_conf 131366----49997589984
Q gi|254780827|r 286 PTRKRA----DLILSKGEDHS 302 (311)
Q Consensus 286 PTr~rA----DlIi~k~~~H~ 302 (311)
T Consensus 271 ~ls~~~al~~~a~leI~~d~n 291 (300)
T COG4240 271 RLSEWIALDLPAILEIAVDLN 291 (300)
T ss_pred HHHHHHHCCCCCEEEEEECCC
T ss_conf 888888718861268866466